Journal articles 2012
Documents
Development and characterization of highly polymorphic long TC repeat microsatellite markers for genetic analysis of peanut
Macedo SE, Moretzsohn MC, Leal-Bertioli SC, Alves DM, Gouvea EG, Azevedo VC, Bertioli DJ (2012). Development and characterization of highly polymorphic long TC repeat microsatellite markers for genetic analysis of peanut. BMC Research Notes 5:86 10pp. (DOI:10.1186/1756-0500-5-86). (G6010.01)
Macedo SE, Moretzsohn MC, Leal-Bertioli SC, Alves DM, Gouvea EG, Azevedo VC, Bertioli DJ (2012). Development and characterization of highly polymorphic long TC repeat microsatellite markers for genetic analysis of peanut. BMC Research Notes 5:86 10pp. (DOI:10.1186/1756-0500-5-86). (G6010.01)
A mixed model QTL analysis for sugarcane multiple-harvest-location trial data
Pastina MM, Malosetti M, Gazaffi R, Mollinari M, Margarido GRA, Oliveira KM, Pinto LR, Souza AP, van Eeuwijk FA and Garcia AAF (2012). A mixed model QTL analysis for sugarcane multiple-harvest-location trial data. Theoretical and Applied Genetics 124 (5) 835–849. (DOI 10.1007/s00122-011-1748-8).
Pastina MM, Malosetti M, Gazaffi R, Mollinari M, Margarido GRA, Oliveira KM, Pinto LR, Souza AP, van Eeuwijk FA and Garcia AAF (2012). A mixed model QTL analysis for sugarcane multiple-harvest-location trial data. Theoretical and Applied Genetics 124 (5) 835–849. (DOI 10.1007/s00122-011-1748-8).
The cassava genome: current progress, future directions
Prochnik S, Reddy Marri P, Desany B, Rabinowicz PD, Kodira C, Mohiuddin M, Rodriguez F, Fauquet C, Tohme J, Harkins T, Rokhsar DS, Rounsley S (2012). The cassava genome: current progress, future directions. Tropical Plant Biology published online: 7pp. (DOI 10.1007/s12042-011-9088-z).
Prochnik S, Reddy Marri P, Desany B, Rabinowicz PD, Kodira C, Mohiuddin M, Rodriguez F, Fauquet C, Tohme J, Harkins T, Rokhsar DS, Rounsley S (2012). The cassava genome: current progress, future directions. Tropical Plant Biology published online: 7pp. (DOI 10.1007/s12042-011-9088-z).
Comparative transcriptome analysis of AP2/EREBP gene family under normal and hormone treatments, and under two drought stresses in NILs setup by Aday Selection and IR64
Sharoni AM, Nuruzzaman M, Satoh K, Moumeni A, Attia K, Venuprasad R, Serraj R, Kumar A, Leung H, RaWul Islam AKM, Kikuchi S (2012). Comparative transcriptome analysis of AP2/EREBP gene family under normal and hormone treatments, and under two drought stresses in NILs setup by Aday Selection and IR64. Molecular Genetics and Genomics 287(1):1–19. (DOI: 10.1007/s00438-011-0659-3).
Sharoni AM, Nuruzzaman M, Satoh K, Moumeni A, Attia K, Venuprasad R, Serraj R, Kumar A, Leung H, RaWul Islam AKM, Kikuchi S (2012). Comparative transcriptome analysis of AP2/EREBP gene family under normal and hormone treatments, and under two drought stresses in NILs setup by Aday Selection and IR64. Molecular Genetics and Genomics 287(1):1–19. (DOI: 10.1007/s00438-011-0659-3).
Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers
Varshney RK, Chen W, Li Y, Bharti AK, Saxena RK, Schlueter JA, Donoghue MTA, Azam S, Fan G, Whaley AM, Farmer AD, Sheridan J, Iwata A, Tuteja R, Penmetsa RV, Wu W, Upadhyaya HD, Yang S-P, Shah T, Saxena KB, Michael T, McCombie WR, Yang B, Zhang G, Yang H, Wang J, Spillane C, Cook DR, May GD, Xu X & Jackson SA (2012). Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology 30: 83–89. Also published online November 2011. (DOI:10.1038/nbt.2022).
Varshney RK, Chen W, Li Y, Bharti AK, Saxena RK, Schlueter JA, Donoghue MTA, Azam S, Fan G, Whaley AM, Farmer AD, Sheridan J, Iwata A, Tuteja R, Penmetsa RV, Wu W, Upadhyaya HD, Yang S-P, Shah T, Saxena KB, Michael T, McCombie WR, Yang B, Zhang G, Yang H, Wang J, Spillane C, Cook DR, May GD, Xu X & Jackson SA (2012). Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nature Biotechnology 30: 83–89. Also published online November 2011. (DOI:10.1038/nbt.2022).
Genetic insight into yield-associated traits of wheat grown in multiple rain-fed environments
Wu X, Chang X, Jing R (2012). Genetic insight into yield-associated traits of wheat grown in multiple rain-fed environments. PLoS ONE 7(2):e31249 (published online). (DOI:10.1371/journal.pone.0031249).
Wu X, Chang X, Jing R (2012). Genetic insight into yield-associated traits of wheat grown in multiple rain-fed environments. PLoS ONE 7(2):e31249 (published online). (DOI:10.1371/journal.pone.0031249).
QTL Analysis for root protein in a backcross family of cassava derived from Manihot esculenta ssp flabellifolia
Akinbo O, Labuschagne MT, Marín J, Ospina C, Santos L, Barrera E, Gutiérrez J, Ewa F, Okogbenin E, Fregene M (2012). QTL Analysis for root protein in a backcross family of cassava derived from Manihot esculenta ssp flabellifolia. Tropical Plant Biology Published online 21 February 2012. 12pp. (DOI: 10.1007/s12042-012-9095-8). Not open access: view abstract
Akinbo O, Labuschagne MT, Marín J, Ospina C, Santos L, Barrera E, Gutiérrez J, Ewa F, Okogbenin E, Fregene M (2012). QTL Analysis for root protein in a backcross family of cassava derived from Manihot esculenta ssp flabellifolia. Tropical Plant Biology Published online 21 February 2012. 12pp. (DOI: 10.1007/s12042-012-9095-8). Not open access: view abstract
Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes
Hiremath PJ, Kumar A, Penmetsa RV, Farmer A, Schlueter JA, Chamarthi SK, Whaley AM, Carrasquilla-Garcia N, Gaur PM, Upadhyaya HD, Kavi Kishor PB, Shah TM, Cook DR and Varshney RK (2012). Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes. Plant Biotechnology Journal published online: 17pp. (DOI: 10.1111/j.1467-7652.2012.00710.x)
Hiremath PJ, Kumar A, Penmetsa RV, Farmer A, Schlueter JA, Chamarthi SK, Whaley AM, Carrasquilla-Garcia N, Gaur PM, Upadhyaya HD, Kavi Kishor PB, Shah TM, Cook DR and Varshney RK (2012). Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes. Plant Biotechnology Journal published online: 17pp. (DOI: 10.1111/j.1467-7652.2012.00710.x)
Integrated genomics, physiology and breeding approaches for improving drought tolerance in crops.
Mir R, Zaman-Allah M, Sreenivasulu N, Trethowan R, Varshney R (2012). Integrated genomics, physiology and breeding approaches for improving drought tolerance in crops. Theoretical and Applied Genetics published online 21pp. Issn: 0040-5752. (DOI: 10.1007/s00122-012-1904-9).
Mir R, Zaman-Allah M, Sreenivasulu N, Trethowan R, Varshney R (2012). Integrated genomics, physiology and breeding approaches for improving drought tolerance in crops. Theoretical and Applied Genetics published online 21pp. Issn: 0040-5752. (DOI: 10.1007/s00122-012-1904-9).
A role for root morphology and related candidate genes in P acquisition efficiency in maize
de Sousa SM, Clark RT, Mendes FF, de Oliveira AC, de Vasconcelos MJV, Parentoni SN, Kochian LV, Guimarães CT, Magalhães JV (2012). A role for root morphology and related candidate genes in P acquisition efficiency in maize. Functional Plant Biology 39(11):925–935. http://dx.doi.org/10.1071/FP12022. (G7010.03.01). Not open access: view abstract
de Sousa SM, Clark RT, Mendes FF, de Oliveira AC, de Vasconcelos MJV, Parentoni SN, Kochian LV, Guimarães CT, Magalhães JV (2012). A role for root morphology and related candidate genes in P acquisition efficiency in maize. Functional Plant Biology 39(11):925–935. http://dx.doi.org/10.1071/FP12022. (G7010.03.01). Not open access: view abstract
