Journal articles 2007
Documents
Marker-assisted introgression of resistance to cassava mosaic disease into Latin American germplasm for the genetic improvement of cassava in Africa
Okogbenin E, Porto MCM, Egesi C, Mba C, Espinosa E, Santos LG, Ospina C, Marín J, Barrera E, Gutiérrez J, Ekanayake I, Iglesias C and Fregene MA (2007). Marker-assisted introgression of resistance to cassava mosaic disease into Latin American germplasm for the genetic improvement of cassava in Africa. Crop Science 47(5):1895–1904 (DOI:10.2135/cropsci2006.10.0688). Not open access: view online
Okogbenin E, Porto MCM, Egesi C, Mba C, Espinosa E, Santos LG, Ospina C, Marín J, Barrera E, Gutiérrez J, Ekanayake I, Iglesias C and Fregene MA (2007). Marker-assisted introgression of resistance to cassava mosaic disease into Latin American germplasm for the genetic improvement of cassava in Africa. Crop Science 47(5):1895–1904 (DOI:10.2135/cropsci2006.10.0688). Not open access: view online
Genetic diversity of cowpea [Vigna unguiculata (L.) Walp.] in four West African and USA breeding programs as determined by AFLP analysis
Fang J, Chao CCT, Roberts PA and Ehlers JD (2007). Genetic diversity of cowpea [Vigna unguiculata (L.) Walp.] in four West African and USA breeding programs as determined by AFLP analysis. Genetic Resources and Crop Evolution 54(6):1197–1209. (DOI: 10.1007/s10722-006-9101-9). Not open access: view abstract
Fang J, Chao CCT, Roberts PA and Ehlers JD (2007). Genetic diversity of cowpea [Vigna unguiculata (L.) Walp.] in four West African and USA breeding programs as determined by AFLP analysis. Genetic Resources and Crop Evolution 54(6):1197–1209. (DOI: 10.1007/s10722-006-9101-9). Not open access: view abstract
Domestication, genomics and the future for banana
Heslop-Harrison JS and Schwarzacher T (2007). Domestication, genomics and the future for banana. Annals of Botany 100(5):1073–1084. (DOI: 10.1093/aob/mcm191).
Heslop-Harrison JS and Schwarzacher T (2007). Domestication, genomics and the future for banana. Annals of Botany 100(5):1073–1084. (DOI: 10.1093/aob/mcm191).
A gene in the multidrug and toxic compound extrusion (MATE) family confers aluminium tolerance in sorghum
Magalhães JV, Liu J, Guimarães CT, Lana UGP, Alves VMC, Wang YH, Schaffert RE, Hoekenga OA, Piñeros MA, Shaff JE, Klein PE, Carneiro NP, Coelho CM, Trick HN and Kochian LV (2007). A gene in the multidrug and toxic compound extrusion (MATE) family confers aluminium tolerance in sorghum. Nature Genetics 39(9):1156–1161 (DOI: 10.1038/ng2074). Not open access: view abstract
Magalhães JV, Liu J, Guimarães CT, Lana UGP, Alves VMC, Wang YH, Schaffert RE, Hoekenga OA, Piñeros MA, Shaff JE, Klein PE, Carneiro NP, Coelho CM, Trick HN and Kochian LV (2007). A gene in the multidrug and toxic compound extrusion (MATE) family confers aluminium tolerance in sorghum. Nature Genetics 39(9):1156–1161 (DOI: 10.1038/ng2074). Not open access: view abstract
Extensive simple sequence repeat genotyping of potato landraces supports a major reevaluation of their gene pool structure and classification
Spooner DM, Nuñez J, Trujillo G, del Rosario Herrera M, Guzmán F and Ghislain M (2007). Extensive simple sequence repeat genotyping of potato landraces supports a major reevaluation of their gene pool structure and classification. Proceedings of the National Academy of Sciences of the United States of America 104(49):19398–19403 (DOI: 10.1073/pnas.0709796104). View online
Spooner DM, Nuñez J, Trujillo G, del Rosario Herrera M, Guzmán F and Ghislain M (2007). Extensive simple sequence repeat genotyping of potato landraces supports a major reevaluation of their gene pool structure and classification. Proceedings of the National Academy of Sciences of the United States of America 104(49):19398–19403 (DOI: 10.1073/pnas.0709796104). View online
Identification of an AFLP fragment linked to rust resistance in asparagus bean and its conversion to a SCAR marker
Li G, Liu Y, Ehlers JD, Zhu Z, Wu X, Wang B and Lu Z (2007). Identification of an AFLP fragment linked to rust resistance in asparagus bean and its conversion to a SCAR marker. Horticultural Science 42(5):1153–1156. Not open access: view abstract
Li G, Liu Y, Ehlers JD, Zhu Z, Wu X, Wang B and Lu Z (2007). Identification of an AFLP fragment linked to rust resistance in asparagus bean and its conversion to a SCAR marker. Horticultural Science 42(5):1153–1156. Not open access: view abstract
Isolation and characterization of the highly repeated fraction of the banana genome
Hřibová E, Doleželová M, Town CD, Macas J, Doležel J (2007). Isolation and characterization of the highly repeated fraction of the banana genome. Cytogenetic and Genome Research 119(3–4):268–274. (DOI: 10.1159/000112073). Not open access: view abstract
Hřibová E, Doleželová M, Town CD, Macas J, Doležel J (2007). Isolation and characterization of the highly repeated fraction of the banana genome. Cytogenetic and Genome Research 119(3–4):268–274. (DOI: 10.1159/000112073). Not open access: view abstract
Data resolution: a jackknife procedure for determining the consistency of molecular marker datasets
van Hintum T (2007). Data resolution: a jackknife procedure for determining the consistency of molecular marker datasets. Theoretical and Applied Genetics 115 (3):343–349. (DOI: 10.1007/s00122-007-0566-5).
The results of genetic diversity studies using molecular markers not only depend on the biology of the studied objects but also on the quality of the marker data. Poor data quality may hamper the correct answering of biological questions. A new statistic is proposed to estimate the quality of a marker data set with regard to its ability to describe the structure of the biological material under study. This statistic is called data resolution (DR). It is calculated by splitting a marker data set at random into two sets each with half the number of markers. In each set, similarities between all pairs of objects are calculated.
van Hintum T (2007). Data resolution: a jackknife procedure for determining the consistency of molecular marker datasets. Theoretical and Applied Genetics 115 (3):343–349. (DOI: 10.1007/s00122-007-0566-5).
The results of genetic diversity studies using molecular markers not only depend on the biology of the studied objects but also on the quality of the marker data. Poor data quality may hamper the correct answering of biological questions. A new statistic is proposed to estimate the quality of a marker data set with regard to its ability to describe the structure of the biological material under study. This statistic is called data resolution (DR). It is calculated by splitting a marker data set at random into two sets each with half the number of markers. In each set, similarities between all pairs of objects are calculated.
Large variation in salinity tolerance is explained by differences in the sensitivity of reproductive stages in chickpea
Vadez V, Krishnamurthy L, Gaur PM, Upadhyaya HD, Hoisington DA, Varshney RK, Turner NC and Siddique KHM (2007). Large variation in salinity tolerance is explained by differences in the sensitivity of reproductive stages in chickpea. Field Crops Research 104(1–3):123–129. (DOI: 10.1016/j.fcr.2007.05.014). Not open access: view abstract
Vadez V, Krishnamurthy L, Gaur PM, Upadhyaya HD, Hoisington DA, Varshney RK, Turner NC and Siddique KHM (2007). Large variation in salinity tolerance is explained by differences in the sensitivity of reproductive stages in chickpea. Field Crops Research 104(1–3):123–129. (DOI: 10.1016/j.fcr.2007.05.014). Not open access: view abstract
A model of sorghum photoperiodism using the concept of threshold-lowering during prolonged appetence
Dingkuhn M, Kouressy M, Vaksmann M, Clerget B and Chantereau J (2007). A model of sorghum photoperiodism using the concept of threshold-lowering during prolonged appetence. European Journal of Agronomy published online 23 July 2007. Also printed in 2008. (DOI: 10.1016/j.eja.2007.05.005). Not open access: view abstract
Dingkuhn M, Kouressy M, Vaksmann M, Clerget B and Chantereau J (2007). A model of sorghum photoperiodism using the concept of threshold-lowering during prolonged appetence. European Journal of Agronomy published online 23 July 2007. Also printed in 2008. (DOI: 10.1016/j.eja.2007.05.005). Not open access: view abstract
