Journal articles 2012
Documents
Identification of novel quantitative trait loci for days to ear emergence and flag leaf glaucousness in a bread wheat (Triticum aestivum L.) population adapted to southern Australian conditions
Bennett D, Izanloo A, Edwards J, Kuchel H, Chalmers K, Tester M, Reynolds M, Schnurbusch T and Langridge P (2011). Identification of novel quantitative trait loci for days to ear emergence and flag leaf glaucousness in a bread wheat (Triticum aestivum L.) population adapted to southern Australian conditions. Theoretical and Applied Genetics 124(4):697–711. (DOI 10.1007/s00122-011-1740-3). Not open access: view abstract
Bennett D, Izanloo A, Edwards J, Kuchel H, Chalmers K, Tester M, Reynolds M, Schnurbusch T and Langridge P (2011). Identification of novel quantitative trait loci for days to ear emergence and flag leaf glaucousness in a bread wheat (Triticum aestivum L.) population adapted to southern Australian conditions. Theoretical and Applied Genetics 124(4):697–711. (DOI 10.1007/s00122-011-1740-3). Not open access: view abstract
Molecular genetic diversity analysis in emmer wheat (Triticum dicoccon Schrank) from India
Salunkhe A, Tamhankar S, Tetali S, Zaharieva M, Bonnett D, Trethowan R and Misra S (2012). Molecular genetic diversity analysis in emmer wheat (Triticum dicoccon Schrank) from India. Genetic Resources and Crop Evolution published online. Print ISSN: 0925-9864, Online ISSN: 1573-5109. (DOI: 10.1007/s10722-012-9823-9). Not open access: view abstract
Salunkhe A, Tamhankar S, Tetali S, Zaharieva M, Bonnett D, Trethowan R and Misra S (2012). Molecular genetic diversity analysis in emmer wheat (Triticum dicoccon Schrank) from India. Genetic Resources and Crop Evolution published online. Print ISSN: 0925-9864, Online ISSN: 1573-5109. (DOI: 10.1007/s10722-012-9823-9). Not open access: view abstract
Highly informative genic and genomic SSR markers to facilitate molecular breeding in cultivated groundnut (Arachis hypogaea)
Pandey MK, Gautami B, Jayakumar T, Sriswathi M, Upadhyaya HD, Gowda MVC, Radhakrishnan T, Bertioli DJ, Knapp SJ, Cook DR, Varshney RK (2012). Highly informative genic and genomic SSR markers to facilitate molecular breeding in cultivated groundnut (Arachis hypogaea). Plant Breeding 131(1):139–147. Also published online in 2011. (DOI: 10.1111/j.1439-0523.2011.01911.x). View abstract online
Pandey MK, Gautami B, Jayakumar T, Sriswathi M, Upadhyaya HD, Gowda MVC, Radhakrishnan T, Bertioli DJ, Knapp SJ, Cook DR, Varshney RK (2012). Highly informative genic and genomic SSR markers to facilitate molecular breeding in cultivated groundnut (Arachis hypogaea). Plant Breeding 131(1):139–147. Also published online in 2011. (DOI: 10.1111/j.1439-0523.2011.01911.x). View abstract online
Molecular markers and their application to cassava breeding: past, present and future
Ferguson M, Rabbi I, Kim DJ, Gedil M, Lopez-Lavalle LA, Okogbenin E (2012). Molecular markers and their application to cassava breeding: past, present and future. Tropical Plant Biology 5(1): (2012), 95–109, (DOI:10.1007/s12042-011-9087-0). Not open access: view abstract
Ferguson M, Rabbi I, Kim DJ, Gedil M, Lopez-Lavalle LA, Okogbenin E (2012). Molecular markers and their application to cassava breeding: past, present and future. Tropical Plant Biology 5(1): (2012), 95–109, (DOI:10.1007/s12042-011-9087-0). Not open access: view abstract
Field evaluation of rice genotypes from the two cultivated species (Oryza sativa L. and Oryza glaberrima Steud.) and their interspecifics for tolerance to drought
Ndjiondjop MN, Futakuchi K, Cisse F, Baimey H, Bocco R (2012). Field evaluation of rice genotypes from the two cultivated species (Oryza sativa L. and Oryza glaberrima Steud.) and their interspecifics for tolerance to drought. Crop Science 52(2):524–538. (DOI: 10.2135/cropsci2011.05.0287). Not open access: view abstract
Ndjiondjop MN, Futakuchi K, Cisse F, Baimey H, Bocco R (2012). Field evaluation of rice genotypes from the two cultivated species (Oryza sativa L. and Oryza glaberrima Steud.) and their interspecifics for tolerance to drought. Crop Science 52(2):524–538. (DOI: 10.2135/cropsci2011.05.0287). Not open access: view abstract
Development of a Mesoamerican intra-genepool genetic map for quantitative trait loci detection in a drought tolerant × susceptible common bean (Phaseolus vulgaris L.) cross.
Blair MW, Galeano CH, Tovar E, Muñoz Torres MC, Velasco Castrillón A, Beebe SE, Rao IM (2012). Development of a Mesoamerican intra-genepool genetic map for quantitative trait loci detection in a drought tolerant × susceptible common bean (Phaseolus vulgaris L.) cross. Molecular Breeding 29(1):71–88 (DOI 10.1007/s11032-010-9527-9). Also published online in 2010.
Blair MW, Galeano CH, Tovar E, Muñoz Torres MC, Velasco Castrillón A, Beebe SE, Rao IM (2012). Development of a Mesoamerican intra-genepool genetic map for quantitative trait loci detection in a drought tolerant × susceptible common bean (Phaseolus vulgaris L.) cross. Molecular Breeding 29(1):71–88 (DOI 10.1007/s11032-010-9527-9). Also published online in 2010.
An intra-specific consensus genetic map of pigeonpea [Cajanus cajan (L) Millspaugh] derived from six mapping population
Bohra A, Saxena RK, Gnanesh BN, Saxena KB, Byregowda M, Rathore A, KaviKishor PB, Cook DR, Varshney RK (2012). An intra-specific consensus genetic map of pigeonpea [Cajanus cajan (L) Millspaugh] derived from six mapping populations. Theoretical and Applied Genetics 125(6):1325–1338. (DOI: 10.1007/s00122-012-1916-5).
Pigeonpea (Cajanus cajan L.) is an important food legume crop of rainfed agriculture. Owing to exposure of the crop to a number of biotic and abiotic stresses, the crop productivity has remained stagnant for almost last five decades at ca. 750 kg/ha. The availability of a cytoplasmic male sterility (CMS) system has facilitated the development and release of hybrids which are expected to enhance the productivity of pigeonpea. Recent advances in genomics and molecular breeding such as marker-assisted selection (MAS) offer the possibility to accelerate hybrid breeding. Molecular markers and genetic maps are pre-requisites for deploying MAS in breeding. However, in the case of pigeonpea, only one inter- and two intra-specific genetic maps are available so far. Here, four new intra-specific genetic maps comprising 59–140 simple sequence repeat (SSR) loci with map lengths ranging from 586.9 to 881.6 cM have been constructed.
Bohra A, Saxena RK, Gnanesh BN, Saxena KB, Byregowda M, Rathore A, KaviKishor PB, Cook DR, Varshney RK (2012). An intra-specific consensus genetic map of pigeonpea [Cajanus cajan (L) Millspaugh] derived from six mapping populations. Theoretical and Applied Genetics 125(6):1325–1338. (DOI: 10.1007/s00122-012-1916-5).
Pigeonpea (Cajanus cajan L.) is an important food legume crop of rainfed agriculture. Owing to exposure of the crop to a number of biotic and abiotic stresses, the crop productivity has remained stagnant for almost last five decades at ca. 750 kg/ha. The availability of a cytoplasmic male sterility (CMS) system has facilitated the development and release of hybrids which are expected to enhance the productivity of pigeonpea. Recent advances in genomics and molecular breeding such as marker-assisted selection (MAS) offer the possibility to accelerate hybrid breeding. Molecular markers and genetic maps are pre-requisites for deploying MAS in breeding. However, in the case of pigeonpea, only one inter- and two intra-specific genetic maps are available so far. Here, four new intra-specific genetic maps comprising 59–140 simple sequence repeat (SSR) loci with map lengths ranging from 586.9 to 881.6 cM have been constructed.
Comparative transcriptome analysis of AP2/EREBP gene family under normal and hormone treatments, and under two drought stresses in NILs setup by Aday Selection and IR64
Sharoni AM, Nuruzzaman M, Satoh K, Moumeni A, Attia K, Venuprasad R, Serraj R, Kumar A, Leung H, RaWul Islam AKM, Kikuchi S (2012). Comparative transcriptome analysis of AP2/EREBP gene family under normal and hormone treatments, and under two drought stresses in NILs setup by Aday Selection and IR64. Molecular Genetics and Genomics 287(1):1–19. (DOI: 10.1007/s00438-011-0659-3).
Sharoni AM, Nuruzzaman M, Satoh K, Moumeni A, Attia K, Venuprasad R, Serraj R, Kumar A, Leung H, RaWul Islam AKM, Kikuchi S (2012). Comparative transcriptome analysis of AP2/EREBP gene family under normal and hormone treatments, and under two drought stresses in NILs setup by Aday Selection and IR64. Molecular Genetics and Genomics 287(1):1–19. (DOI: 10.1007/s00438-011-0659-3).
Genetic and molecular mechanisms of aluminum tolerance in plants
Simões CC; Melo JO; Magalhaes JV; Guimarães CT (2012). Genetic and molecular mechanisms of aluminum tolerance in plants. Genetics and Molecular Research 11 (3):1949–1957. (DOI: 10.4238/2012.July.19.14). http://geneticsmr.com/articles/1770. (G7010.03.02).
Genes encoding membrane transporters and accessory transcription factors, as well as cis-elements that enhance gene expression are involved in Al tolerance in plants, thus studies of these genes and accessory factors should be the focus of molecular breeding efforts aimed at improving Al tolerance in crops. In this review, we describe the main genetic and molecular studies that led to the identification and cloning of genes associated with Al tolerance in plants. We include recent findings on the regulation of genes associated with Al tolerance. Understanding the genetic, molecular, and physiological aspects of Al tolerance in plants is important for generating cultivars adapted to acid soils, thereby contributing to food security worldwide.
Simões CC; Melo JO; Magalhaes JV; Guimarães CT (2012). Genetic and molecular mechanisms of aluminum tolerance in plants. Genetics and Molecular Research 11 (3):1949–1957. (DOI: 10.4238/2012.July.19.14). http://geneticsmr.com/articles/1770. (G7010.03.02).
Genes encoding membrane transporters and accessory transcription factors, as well as cis-elements that enhance gene expression are involved in Al tolerance in plants, thus studies of these genes and accessory factors should be the focus of molecular breeding efforts aimed at improving Al tolerance in crops. In this review, we describe the main genetic and molecular studies that led to the identification and cloning of genes associated with Al tolerance in plants. We include recent findings on the regulation of genes associated with Al tolerance. Understanding the genetic, molecular, and physiological aspects of Al tolerance in plants is important for generating cultivars adapted to acid soils, thereby contributing to food security worldwide.
Development and characterization of highly polymorphic long TC repeat microsatellite markers for genetic analysis of peanut
Macedo SE, Moretzsohn MC, Leal-Bertioli SC, Alves DM, Gouvea EG, Azevedo VC, Bertioli DJ (2012). Development and characterization of highly polymorphic long TC repeat microsatellite markers for genetic analysis of peanut. BMC Research Notes 5:86 10pp. (DOI:10.1186/1756-0500-5-86). (G6010.01)
Macedo SE, Moretzsohn MC, Leal-Bertioli SC, Alves DM, Gouvea EG, Azevedo VC, Bertioli DJ (2012). Development and characterization of highly polymorphic long TC repeat microsatellite markers for genetic analysis of peanut. BMC Research Notes 5:86 10pp. (DOI:10.1186/1756-0500-5-86). (G6010.01)