Day One, Tuesday, 16th September
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Plenay session I: GCP perspectives
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Programme perspectives (J-M Ribaut)
Subprogramme 1 (JC Glaszmann)
Subprogramme 2 (RK Varshney)
Subprogramme 3 (P Monneveux)
Subprogramme 4 (G McLaren)
Subprogramme 5 (C de Vicente)
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Stakeholder perspectives
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The history and the role of BIOTEC (Thailand) as a hub for scientific development in the region (M Tanticharoen, BIOTEC)
The Community of Practice concept applied to rice production in the Mekong Region—the Cambodia component (O Makara, CARDI, Cambodia)
Linking public–private seed sectors in India: a model for GCP? (D Joshi, Barwale Foundation)
The challenges of product delivery (Indonesia) (M Bustaman, ICABIOGRAD)
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Parallel Subprogramme Sessions
Subprogramme 1
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Introduction (JC Glaszmann)
Data quality, Data resolution (Theo van Hintum, WUR)
Reference data validation (Jean-François Rami, Agropolis−CIRAD)
Advanced genotyping in rice (Ken McNally, IRRI)
Resequencing in ADOC (Dominique This, Agropolis−CIRAD)
Diversity at AlTol gene in sorghum (Jurandir Magalhaes, EMBRAPA)
Further mining diversity (Ken McNally in the absence of Ruaraidh Sackville Hamilton, IRRI)
Haplotype management (Claire Billot/Gautier Sarah, Agropolis−CIRAD)
Sampling markers and germplasm (Fred van Eeuwijk, WUR)
Lessons learned in various projects (Hari Upadhyaya et al, ICRISAT)
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Subprogramme 2
Subtheme 1: Genomic resources and genome infrastructure
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Agenda/Intro (RK Varshney)
DArT for generating genomic resources in less characterised species (Andrzej Killian, DArT Pty Ltd, Australia)
Development of genomic and genetic resource in sweet potato – GCP Wave I project (Roland Schafleitner, CIP, Peru)
Development of genomic resources in pigeonpea - linking of Indian Pigeonpea Genomics Initiative with Wave II commissioned project and TLII (Nagendra Singh, NRCPB, India)
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Subtheme 2: Comparative genomics
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Comparative genomics in legumes- SP2/SP3 project links with TLI and GLIP (David Bertioli, UCB, Brazil)
Orthologous genomics tools - Phylogenomics, GreenPhyl and GOST– SP4 support tool (Matthieu Conte, IRRI, Philippines)
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Subtheme 3: Gene discovery
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Comparative analysis of gene expression profiles across crops- maize/rice (Ramil Mauleon, IRRI, Philippines)
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Subtheme 4: Marker/gene/ pathway validation
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Staygreen QTLs in sorghum- links with new project to be started under Challenge Initiative (Andrew Borrell, DPI, Australia)
Reverse genetics in rice for gene validation (Andy Pereira, VBI, USA)
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Subprogramme 3
Topic 1: Promoting the use of molecular markers in the South, expected impact and constraints
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Example of groundnut (Daniel Fonceka, ISRA Senegal)
Example of cowpea (Jean-Baptiste Tignegre, INERA Burkina-Faso)
Topic 2: Validation projects: Constraints to development and implementation (Abdel Ismael, IRRI)
Topic 3: Building a phenotyping network, focusing on users needs (Glen Hyman, CIAT)
Topic 4 (jointly with SP5): Crop platforms: Opinions from users
Example of rice in Asia (Dinesh Joshi, Barwale Foundation, India)
Example of rice in Africa (Mathias Lorieux, CIAT & Marie-Noelle Ndjiondjop, WARDA)
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Subprogramme 5
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1) Capacity Building à la Carte
Enhancing capacity of ICABIOGRAD in phenotyping and molecular analysis to develop elite rice lines suitable to Indonesian uplands (Masdiar Bustaman, ICABIOGRAD)
2) Communities of Practice
Marker-Assisted Selection of Rice in the Mekong Basin (Theerayut Toonjinda, RGDU, Thailand)
A Cassava Breeding Community of Practice in Africa for Accelerated Production and Dissemination of Farmer-Preferred Cassav Varieties Resistant to Pests and Diseases (Emmanuel Okogbenin, CIAT/NRCRI)
3) Genotyping Support Service
Looking for new sources of drought tolerance in maize by combining introduced varieties with local germplasm (James Gethi, KARI, Kenya)
The experience of providing genotyping services to breeders through the GSS (S Senthilvel, ICRISAT)
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Day Two, Wednesday, 17th September
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Plenary session I: Impact pathways
Plenary session II: Gene discovery
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Day Three, Thursday, 18th September
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Plenary session I: Marker development and breeding applications
Plenary session II: World Cafe (click on hyperlink for discussion summary minutes)
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Day Four, Friday, 19th September
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Plenary session I: Reference collections
Plenary session II: Genomic resources
Plenary session III: Tropical Legumes I
Plenary session IV: Molecular Breeding Platform
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Day Five, Saturday, 20th September
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Minutes from Brainstorming session II: Molecular Breeding Platform (MBP)
1. Experimental design, data management and analysis for molecular breeding projects (Fred van Eeuwijk)
2. Decision support tools for molecular breeding (Scott Chapman)
3. Sharing crop information and required access to public data resources (Thomas Metz)
4. Marker service laboratories – access, turnaround, costs and quality (Humberto Gomez)
5. Phenotyping services – environments, grain and nutrition quality, metabolomics (Vincent Vadez)
Plenary session I: Support services and enabling delivery
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